STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YJU2YJU2 splicing factor homolog. (325 aa)    
Predicted Functional Partners:
CDC40
Cell division cycle 40.
    
 0.999
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.999
DHX38
DEAH-box helicase 38.
   
 0.999
BUD31
BUD31 homolog.
    
 
 0.997
CDC5L
Cell division cycle 5 like.
    
 
 0.997
SRRM2
Serine/arginine repetitive matrix 2.
   
 0.997
PRPF19
Pre-mRNA processing factor 19.
    
 
 0.997
CWC25
Cir_N domain-containing protein.
   
 0.996
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
    
 
 0.995
LOC102431258
Cir_N domain-containing protein.
   
 0.994
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.