Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FOXA2 | INS | ENSMLUP00000017813 | ENSMLUP00000003521 | Forkhead box A2. | Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. | 0.611 |
FOXA2 | NEUROG3 | ENSMLUP00000017813 | ENSMLUP00000019233 | Forkhead box A2. | Neurogenin 3. | 0.738 |
FOXA2 | NKX2-2 | ENSMLUP00000017813 | ENSMLUP00000008537 | Forkhead box A2. | NK2 homeobox 2. | 0.735 |
FOXA2 | PAX4 | ENSMLUP00000017813 | ENSMLUP00000019100 | Forkhead box A2. | Paired box 4. | 0.614 |
FOXA2 | PAX6 | ENSMLUP00000017813 | ENSMLUP00000005952 | Forkhead box A2. | Paired box 6. | 0.816 |
FOXA2 | RFX6 | ENSMLUP00000017813 | ENSMLUP00000006098 | Forkhead box A2. | Regulatory factor X6. | 0.616 |
FOXA2 | SST | ENSMLUP00000017813 | ENSMLUP00000011737 | Forkhead box A2. | Somatostatin. | 0.445 |
GHRL | INS | ENSMLUP00000010938 | ENSMLUP00000003521 | Ghrelin and obestatin prepropeptide. | Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. | 0.988 |
GHRL | NEUROG3 | ENSMLUP00000010938 | ENSMLUP00000019233 | Ghrelin and obestatin prepropeptide. | Neurogenin 3. | 0.730 |
GHRL | PAX4 | ENSMLUP00000010938 | ENSMLUP00000019100 | Ghrelin and obestatin prepropeptide. | Paired box 4. | 0.617 |
GHRL | PAX6 | ENSMLUP00000010938 | ENSMLUP00000005952 | Ghrelin and obestatin prepropeptide. | Paired box 6. | 0.443 |
GHRL | RFX6 | ENSMLUP00000010938 | ENSMLUP00000006098 | Ghrelin and obestatin prepropeptide. | Regulatory factor X6. | 0.570 |
GHRL | SST | ENSMLUP00000010938 | ENSMLUP00000011737 | Ghrelin and obestatin prepropeptide. | Somatostatin. | 0.769 |
HES1 | NEUROG3 | ENSMLUP00000007790 | ENSMLUP00000019233 | Hes family bHLH transcription factor 1. | Neurogenin 3. | 0.906 |
INS | FOXA2 | ENSMLUP00000003521 | ENSMLUP00000017813 | Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. | Forkhead box A2. | 0.611 |
INS | GHRL | ENSMLUP00000003521 | ENSMLUP00000010938 | Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. | Ghrelin and obestatin prepropeptide. | 0.988 |
INS | NEUROG3 | ENSMLUP00000003521 | ENSMLUP00000019233 | Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. | Neurogenin 3. | 0.733 |
INS | NKX2-2 | ENSMLUP00000003521 | ENSMLUP00000008537 | Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. | NK2 homeobox 2. | 0.805 |
INS | PAX4 | ENSMLUP00000003521 | ENSMLUP00000019100 | Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. | Paired box 4. | 0.884 |
INS | PAX6 | ENSMLUP00000003521 | ENSMLUP00000005952 | Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. | Paired box 6. | 0.842 |
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