ENSMLUP00000021665 protein (Myotis lucifugus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSMLUP00000021665

annotation not available (136 aa)

Predicted Functional Partners:

LOC106698231

0.990

ENSMLUP00000017704

0.990

ENSMLUP00000020187

0.990

LOC102424579

0.990

ENSMLUP00000022553

0.990

WDR5

0.984

SMARCA4

0.969

G1QFH4_MYOLU

0.969

LOC102418533

0.967

ENSMLUP00000016713

0.967

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMLUP00000016713	ENSMLUP00000017704	ENSMLUP00000016713	ENSMLUP00000017704	annotation not available	annotation not available	0.983
ENSMLUP00000016713	ENSMLUP00000020187	ENSMLUP00000016713	ENSMLUP00000020187	annotation not available	annotation not available	0.983
ENSMLUP00000016713	ENSMLUP00000021665	ENSMLUP00000016713	ENSMLUP00000021665	annotation not available	annotation not available	0.967
ENSMLUP00000016713	ENSMLUP00000022553	ENSMLUP00000016713	ENSMLUP00000022553	annotation not available	annotation not available	0.983
ENSMLUP00000016713	G1QFH4_MYOLU	ENSMLUP00000016713	ENSMLUP00000022457	annotation not available	Histone H2A; Belongs to the histone H2A family.	0.900
ENSMLUP00000016713	LOC102418533	ENSMLUP00000016713	ENSMLUP00000016432	annotation not available	annotation not available	0.900
ENSMLUP00000016713	LOC102424579	ENSMLUP00000016713	ENSMLUP00000022116	annotation not available	annotation not available	0.983
ENSMLUP00000016713	LOC106698231	ENSMLUP00000016713	ENSMLUP00000000054	annotation not available	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.983
ENSMLUP00000016713	SMARCA4	ENSMLUP00000016713	ENSMLUP00000004094	annotation not available	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.	0.938
ENSMLUP00000016713	WDR5	ENSMLUP00000016713	ENSMLUP00000002037	annotation not available	WD repeat domain 5.	0.625
ENSMLUP00000017704	ENSMLUP00000016713	ENSMLUP00000017704	ENSMLUP00000016713	annotation not available	annotation not available	0.983
ENSMLUP00000017704	ENSMLUP00000020187	ENSMLUP00000017704	ENSMLUP00000020187	annotation not available	annotation not available	0.801
ENSMLUP00000017704	ENSMLUP00000021665	ENSMLUP00000017704	ENSMLUP00000021665	annotation not available	annotation not available	0.990
ENSMLUP00000017704	ENSMLUP00000022553	ENSMLUP00000017704	ENSMLUP00000022553	annotation not available	annotation not available	0.801
ENSMLUP00000017704	G1QFH4_MYOLU	ENSMLUP00000017704	ENSMLUP00000022457	annotation not available	Histone H2A; Belongs to the histone H2A family.	0.988
ENSMLUP00000017704	LOC102418533	ENSMLUP00000017704	ENSMLUP00000016432	annotation not available	annotation not available	0.983
ENSMLUP00000017704	LOC102424579	ENSMLUP00000017704	ENSMLUP00000022116	annotation not available	annotation not available	0.801
ENSMLUP00000017704	LOC106698231	ENSMLUP00000017704	ENSMLUP00000000054	annotation not available	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.801
ENSMLUP00000017704	SMARCA4	ENSMLUP00000017704	ENSMLUP00000004094	annotation not available	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.	0.978
ENSMLUP00000017704	WDR5	ENSMLUP00000017704	ENSMLUP00000002037	annotation not available	WD repeat domain 5.	0.805