STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC48372.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (406 aa)    
Predicted Functional Partners:
AJC48374.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.908
AJC48375.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.797
AJC48369.1
Intracellular growth locus, subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.765
AJC48373.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.723
AJC48376.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.645
AJC48370.1
Intracellular growth locus iglB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.622
AJC49423.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.593
AJC49520.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.574
AJC48371.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.516
AJC48377.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.443
Your Current Organism:
Allofrancisella guangzhouensis
NCBI taxonomy Id: 594679
Other names: A. guangzhouensis, ATCC BAA-2361, Allofrancisella guangzhouensis (Qu et al. 2013) Qu et al. 2016, CCUG 60119, Francisella guangzhouensis, Francisella guangzhouensis Qu et al. 2013, Francisella sp. 08HL01032, Francisella sp. 10HL1960, Francisella sp. 10HP82-6, NCTC 13503, strain 08HL01032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.