STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC48865.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)    
Predicted Functional Partners:
AJC48864.1
16S rRNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.577
AJC48384.1
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.504
AJC48921.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.429
AJC48863.1
Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.426
AJC49269.1
1-aminocyclopropane-1-carboxylate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.420
Your Current Organism:
Allofrancisella guangzhouensis
NCBI taxonomy Id: 594679
Other names: A. guangzhouensis, ATCC BAA-2361, Allofrancisella guangzhouensis (Qu et al. 2013) Qu et al. 2016, CCUG 60119, Francisella guangzhouensis, Francisella guangzhouensis Qu et al. 2013, Francisella sp. 08HL01032, Francisella sp. 10HL1960, Francisella sp. 10HP82-6, NCTC 13503, strain 08HL01032
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.