STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF6PHD finger protein 6. (366 aa)    
Predicted Functional Partners:
ENSRFEP00010003891
annotation not available
   
 0.900
ENSRFEP00010013391
annotation not available
   
 0.900
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.900
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.892
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
 0.874
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.864
RUNX1
RUNX family transcription factor 1.
   
 0.819
SETBP1
SET binding protein 1.
   
 0.816
KDM6A
Lysine demethylase 6A.
  
 0.812
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.806
Your Current Organism:
Rhinolophus ferrumequinum
NCBI taxonomy Id: 59479
Other names: R. ferrumequinum, greater horseshoe bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.