STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KALRNKalirin RhoGEF kinase. (2976 aa)    
Predicted Functional Partners:
RAC1
Rac family small GTPase 1.
   
 0.896
CDC42
Cell division cycle 42.
   
 0.883
ENSRFEP00010019303
annotation not available
   
 0.883
RAC2
Rac family small GTPase 2.
   
 0.878
RAC3
Rac family small GTPase 3.
   
 0.878
RHOB
Ras homolog family member B.
   
 0.855
RHOA
Ras homolog family member A.
   
 0.855
ENSRFEP00010019660
annotation not available
   
 0.855
ENSRFEP00010000060
annotation not available
   
 0.850
RND3
Rho family GTPase 3.
   
 0.850
Your Current Organism:
Rhinolophus ferrumequinum
NCBI taxonomy Id: 59479
Other names: R. ferrumequinum, greater horseshoe bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.