STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXB9Homeobox B9. (250 aa)    
Predicted Functional Partners:
HOXB8
Homeobox B8.
   
 
0.917
HOXB6
Homeobox B6.
   
 
0.891
HOXB5
Homeobox B5.
   
 
0.890
HOXB7
Homeobox B7.
   
 
0.797
HAND2
Heart and neural crest derivatives expressed 2.
    
 
 0.722
HOXC6
Homeobox C6.
  
 
0.708
PBX2
PBX homeobox 2.
    
 
 0.605
PBX4
PBX homeobox 4.
    
 
 0.605
PHF1
PHD finger protein 1.
    
 
 0.602
ENSRFEP00010004242
annotation not available
   
 
0.595
Your Current Organism:
Rhinolophus ferrumequinum
NCBI taxonomy Id: 59479
Other names: R. ferrumequinum, greater horseshoe bat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.