STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU07630.1Myo-inositol 2-dehydrogenase. (377 aa)    
Predicted Functional Partners:
KLU07629.1
Hypothetical protein.
 
    0.872
KLU07631.1
Glycolate dehydrogenase; Overlaps another CDS with the same product name.
  
 
  0.799
KLU07632.1
Glycolate dehydrogenase; Overlaps another CDS with the same product name.
  
 
  0.799
KLU07633.1
Glycolate dehydrogenase.
  
    0.785
KLU01921.1
Oxidoreductase domain protein.
  
     0.661
KLU07634.1
Hypothetical protein.
       0.643
KLU05834.1
Sugar phosphate isomerases/epimerases.
  
    0.640
KLU02373.1
Sugar phosphate isomerases/epimerase.
  
    0.605
KLU04704.1
D-tagatose 3-epimerase.
  
    0.586
KLU04839.1
Hypothetical protein.
  
    0.580
Your Current Organism:
Rhodopirellula islandica
NCBI taxonomy Id: 595434
Other names: DSM 24040, JCM 17612, R. islandica, Rhodopirellula sp. K833, strain K833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.