STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU07610.1Putative xanthan lyase. (553 aa)    
Predicted Functional Partners:
KLU07768.1
Hypothetical protein.
  
     0.760
KLU03842.1
Malonyl CoA-acyl carrier protein transacylase.
  
 0.699
KLU02062.1
Hypothetical protein.
  
     0.686
KLU02821.1
Glycoprotein gp2.
  
     0.605
KLU04072.1
Acetyl xylan esterase.
  
     0.591
KLU06571.1
Malonyl CoA-acyl carrier protein transacylase.
  
 0.576
KLU07217.1
Acetylhydrolase.
  
     0.510
KLU07068.1
Hypothetical protein.
  
     0.487
KLU01596.1
Hypothetical protein.
 
    0.484
KLU06512.1
Sialidase.
  
     0.481
Your Current Organism:
Rhodopirellula islandica
NCBI taxonomy Id: 595434
Other names: DSM 24040, JCM 17612, R. islandica, Rhodopirellula sp. K833, strain K833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.