STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU06963.1Putative protein-transmembrane prediction. (258 aa)    
Predicted Functional Partners:
KLU06962.1
Hypothetical protein.
       0.782
KLU01426.1
Putative serine protease HtrA.
  
 
   0.763
KLU02687.1
Hypothetical protein.
  
     0.730
KLU07839.1
Chaperone protein DnaJ.
  
     0.729
KLU02986.1
Hypothetical protein.
  
     0.727
KLU06961.1
Hypothetical protein.
       0.725
KLU04384.1
Hypothetical protein.
  
     0.722
KLU04573.1
Mammalian cell entry protein.
  
     0.722
KLU06751.1
Mlr2412 protein.
  
     0.719
KLU05785.1
Hypothetical protein.
  
     0.717
Your Current Organism:
Rhodopirellula islandica
NCBI taxonomy Id: 595434
Other names: DSM 24040, JCM 17612, R. islandica, Rhodopirellula sp. K833, strain K833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.