STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU07235.1Transcriptional regulator, AraC family. (250 aa)    
Predicted Functional Partners:
KLU07030.1
Glutamate synthase [NADPH] large chain.
    
  0.834
KLU07039.1
Transcriptional regulator, AraC family.
  
   0.677
KLU03759.1
2-oxoglutarate oxidoreductase, alpha subunit.
     
 0.667
KLU02665.1
Transcription regulator.
  
     0.650
KLU07233.1
D-amino acid dehydrogenase small subunit.
 
     0.595
KLU04226.1
Xylose operon regulatory protein.
  
 
 0.594
KLU03859.1
Xylose operon regulatory protein.
  
    0.578
KLU05248.1
Xylose operon regulatory protein.
  
 
 0.575
KLU07234.1
1-pyrroline-4-hydroxy-2-carboxylate deaminase; Belongs to the DapA family.
       0.537
KLU01169.1
Transcriptional control.
  
    0.515
Your Current Organism:
Rhodopirellula islandica
NCBI taxonomy Id: 595434
Other names: DSM 24040, JCM 17612, R. islandica, Rhodopirellula sp. K833, strain K833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.