STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU06750.1Transcriptional control; Belongs to the sigma-70 factor family. ECF subfamily. (179 aa)    
Predicted Functional Partners:
KLU06749.1
Hypothetical protein.
       0.782
KLU03419.1
RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.759
KLU06122.1
RNA polymerase sigma-54 factor RpoN; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.756
KLU04734.1
Transcriptional control; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.756
KLU07374.1
RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family.
  
     0.734
KLU02391.1
Transcriptional control; Belongs to the sigma-70 factor family.
  
     0.724
KLU06222.1
RNA polymerase sigma factor SigZ; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.723
KLU04154.1
RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.713
KLU04553.1
Transcriptional control; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.672
KLU01265.1
Transcriptional control; Belongs to the sigma-70 factor family.
  
     0.553
Your Current Organism:
Rhodopirellula islandica
NCBI taxonomy Id: 595434
Other names: DSM 24040, JCM 17612, R. islandica, Rhodopirellula sp. K833, strain K833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.