STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU06475.1Inosose isomerase. (329 aa)    
Predicted Functional Partners:
KLU07069.1
Hypothetical protein.
  
     0.623
KLU04704.1
D-tagatose 3-epimerase.
  
     0.588
KLU06474.1
Hypothetical protein.
       0.567
aroE
3-dehydroquinate dehydratase I; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA); Belongs to the type-I 3-dehydroquinase family.
  
 
 0.558
KLU06473.1
Thioredoxin reductase.
       0.552
KLU01463.1
Conserved hypothetical protein-putative NAD-dependent oxidoreductase of the GFO/IDH/MOCA family.
  
    0.545
KLU01958.1
Myo-inositol 2-dehydrogenase 1.
  
    0.487
KLU07630.1
Myo-inositol 2-dehydrogenase.
  
    0.452
KLU07139.1
C-compound and carbohydrate metabolism.
  
    0.449
KLU05834.1
Sugar phosphate isomerases/epimerases.
  
     0.448
Your Current Organism:
Rhodopirellula islandica
NCBI taxonomy Id: 595434
Other names: DSM 24040, JCM 17612, R. islandica, Rhodopirellula sp. K833, strain K833
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