STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU05418.1Hypothetical protein. (352 aa)    
Predicted Functional Partners:
KLU05417.1
General secretion pathway protein K.
  
 
 0.972
KLU05742.1
General secretion pathway protein K.
  
 
 0.949
KLU05421.1
General secretion pathway protein G.
  
  0.783
KLU05419.1
Type II protein secretion system.
     
 0.752
KLU05420.1
Putative protein-signal peptide and transmembrane prediction.
     
 0.723
KLU05416.1
Hypothetical protein.
  
  
 0.555
KLU05415.1
Hypothetical protein.
       0.490
KLU05422.1
Hypothetical protein.
       0.484
KLU05738.1
General secretion pathway protein G.
  
  0.413
Your Current Organism:
Rhodopirellula islandica
NCBI taxonomy Id: 595434
Other names: DSM 24040, JCM 17612, R. islandica, Rhodopirellula sp. K833, strain K833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.