STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU05290.1Putative oxidoreductase. (370 aa)    
Predicted Functional Partners:
KLU05289.1
Nitrogen regulatory protein P-II.
       0.782
KLU06983.1
Oxidoreductase.
  
     0.750
KLU03731.1
Electron transport protein.
  
     0.698
KLU04510.1
NADH-dependent dehydrogenase.
  
     0.680
KLU02995.1
Conserved hypothetical protein-putative oxidoreductase.
  
     0.645
KLU04912.1
Myo-inositol 2-dehydrogenase.
  
     0.612
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
  
  
  0.592
KLU07190.1
NADH-dependent dehydrogenase.
  
     0.590
KLU01463.1
Conserved hypothetical protein-putative NAD-dependent oxidoreductase of the GFO/IDH/MOCA family.
  
     0.586
KLU04402.1
NADH-dependent dehydrogenase.
  
     0.576
Your Current Organism:
Rhodopirellula islandica
NCBI taxonomy Id: 595434
Other names: DSM 24040, JCM 17612, R. islandica, Rhodopirellula sp. K833, strain K833
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