STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU04905.1Fe-S oxidoreductase. (461 aa)    
Predicted Functional Partners:
KLU04904.1
Conserved hypothetical protein-transmembrane prediction.
 
     0.834
ribA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
    
  0.831
KLU03958.1
Polyprenyl synthetase.
 
   
 0.796
KLU04005.1
4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
   
 0.767
KLU01593.1
C-compound and carbohydrate metabolism.
  
    0.749
KLU03959.1
Squalene--hopene cyclase.
 
   
 0.748
KLU04906.1
Hypothetical protein.
       0.746
KLU05843.1
Putative protein-transmembrane prediction.
  
    0.740
KLU04197.1
Serine/threonine protein kinase.
  
    0.732
KLU07944.1
Hypothetical protein.
  
     0.730
Your Current Organism:
Rhodopirellula islandica
NCBI taxonomy Id: 595434
Other names: DSM 24040, JCM 17612, R. islandica, Rhodopirellula sp. K833, strain K833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.