STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU04956.1GAF domain/HD domain protein. (437 aa)    
Predicted Functional Partners:
KLU03087.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domain) with PAS/PAC sensor(s).
 
  
 0.719
KLU01903.1
Two-component signal transduction.
  
 
 0.682
KLU01572.1
Hypothetical protein.
 
 0.678
KLU01262.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.635
KLU04399.1
GGDEF domain protein.
 
 0.634
KLU05892.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domain) with PAS/PAC sensor(s).
  
 0.630
KLU03977.1
Two-component signal transduction.
  
 0.615
KLU06372.1
Iron-sulfur binding protein YPO1417.
     
 0.614
KLU01218.1
Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor.
  
 0.599
KLU07342.1
Chemotaxis protein methyltransferase CheR; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.571
Your Current Organism:
Rhodopirellula islandica
NCBI taxonomy Id: 595434
Other names: DSM 24040, JCM 17612, R. islandica, Rhodopirellula sp. K833, strain K833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.