STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU03980.1Ribose ABC transport system, permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (323 aa)    
Predicted Functional Partners:
KLU03983.1
Ribose ABC transport system, periplasmic ribose-binding protein RbsB.
 0.993
KLU03981.1
Ribose ABC transport system, ATP-binding protein RbsA.
 0.989
KLU05931.1
Ribose ABC transport system, periplasmic ribose-binding protein RbsB.
 0.962
KLU07881.1
Ribose ABC transport system, ATP-binding protein RbsA.
 0.956
KLU02415.1
Ribose transport ATP-binding protein rbsA.
 0.956
KLU07332.1
Xylose ABC transporter, periplasmic xylose-binding protein XylF.
 
 0.872
KLU07882.1
Ribose ABC transport system, permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.677
KLU03982.1
Hypothetical protein.
       0.572
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.566
KLU02899.1
Ribose operon repressor.
 
 
 0.528
Your Current Organism:
Rhodopirellula islandica
NCBI taxonomy Id: 595434
Other names: DSM 24040, JCM 17612, R. islandica, Rhodopirellula sp. K833, strain K833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.