STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU03702.1Beta-xylosidase. (601 aa)    
Predicted Functional Partners:
KLU03703.1
Putative protein-transmembrane prediction.
       0.773
KLU04878.1
Endo-1,4-beta-xylanase A precursor.
 
  
 0.768
KLU04054.1
Polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
 
 
  0.740
KLU05021.1
Rhamnogalacturonan acetylesterase.
  
     0.739
KLU07243.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.683
KLU01460.1
Endo-1,4-beta-xylanase A precursor.
 
  
 0.679
KLU03068.1
Pectate lyase.
 
   
 0.671
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.644
KLU01788.1
Alpha-L-arabinofuranosidase II precursor; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.634
KLU02025.1
Sialic acid-specific 9-O-acetylesterase.
  
     0.596
Your Current Organism:
Rhodopirellula islandica
NCBI taxonomy Id: 595434
Other names: DSM 24040, JCM 17612, R. islandica, Rhodopirellula sp. K833, strain K833
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