Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KLU01474.1 | KLU02944.1 | RISK_006630 | RISK_005240 | DNA gyrase subunit B. | Chaperone protein DnaK; Belongs to the heat shock protein 70 family. | 0.549 |
KLU01474.1 | KLU03570.1 | RISK_006630 | RISK_004467 | DNA gyrase subunit B. | DNA gyrase subunit A. | 0.979 |
KLU01474.1 | dnaK | RISK_006630 | RISK_006634 | DNA gyrase subunit B. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.569 |
KLU01474.1 | metG | RISK_006630 | RISK_004774 | DNA gyrase subunit B. | Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.506 |
KLU01474.1 | rpoC | RISK_006630 | RISK_000972 | DNA gyrase subunit B. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.488 |
KLU01474.1 | yacG | RISK_006630 | RISK_005078 | DNA gyrase subunit B. | Hypothetical protein; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase. | 0.472 |
KLU01474.1 | yidC | RISK_006630 | RISK_004503 | DNA gyrase subunit B. | Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.493 |
KLU01851.1 | KLU02944.1 | RISK_006035 | RISK_005240 | Topoisomerase IV subunit B. | Chaperone protein DnaK; Belongs to the heat shock protein 70 family. | 0.568 |
KLU01851.1 | KLU03570.1 | RISK_006035 | RISK_004467 | Topoisomerase IV subunit B. | DNA gyrase subunit A. | 0.980 |
KLU01851.1 | dnaK | RISK_006035 | RISK_006634 | Topoisomerase IV subunit B. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.524 |
KLU01851.1 | metG | RISK_006035 | RISK_004774 | Topoisomerase IV subunit B. | Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.506 |
KLU01851.1 | rpoC | RISK_006035 | RISK_000972 | Topoisomerase IV subunit B. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.420 |
KLU01851.1 | yacG | RISK_006035 | RISK_005078 | Topoisomerase IV subunit B. | Hypothetical protein; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase. | 0.472 |
KLU01953.1 | KLU02944.1 | RISK_006137 | RISK_005240 | DNA gyrase subunit B. | Chaperone protein DnaK; Belongs to the heat shock protein 70 family. | 0.464 |
KLU01953.1 | KLU03570.1 | RISK_006137 | RISK_004467 | DNA gyrase subunit B. | DNA gyrase subunit A. | 0.979 |
KLU01953.1 | dnaK | RISK_006137 | RISK_006634 | DNA gyrase subunit B. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.413 |
KLU01953.1 | metG | RISK_006137 | RISK_004774 | DNA gyrase subunit B. | Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.506 |
KLU01953.1 | yacG | RISK_006137 | RISK_005078 | DNA gyrase subunit B. | Hypothetical protein; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase. | 0.472 |
KLU01953.1 | yidC | RISK_006137 | RISK_004503 | DNA gyrase subunit B. | Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.439 |
KLU02944.1 | KLU01474.1 | RISK_005240 | RISK_006630 | Chaperone protein DnaK; Belongs to the heat shock protein 70 family. | DNA gyrase subunit B. | 0.549 |
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