STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU03264.1Leader peptidase (Prepilin peptidase). (422 aa)    
Predicted Functional Partners:
KLU07834.1
Type IV fimbrial assembly protein PilC.
  
  
 0.807
KLU06637.1
Type II secretory pathway, component PulF / Type IV fimbrial assembly protein PilC.
  
  
 0.807
KLU05091.1
Type II secretory pathway, component PulF / Type IV fimbrial assembly protein PilC.
  
  
 0.807
KLU07054.1
General secretion pathway protein F.
  
  
 0.806
KLU05737.1
Type IV fimbrial assembly protein PilC.
  
  
 0.803
KLU07833.1
Type IV fimbrial assembly, ATPase PilB.
  
 
 0.796
KLU02435.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
 
 0.793
KLU05089.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
 
 0.792
KLU05086.1
General secretion pathway protein E / Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
 
 0.791
KLU07055.1
General secretion pathway protein E.
  
 
 0.790
Your Current Organism:
Rhodopirellula islandica
NCBI taxonomy Id: 595434
Other names: DSM 24040, JCM 17612, R. islandica, Rhodopirellula sp. K833, strain K833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.