STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU03283.1Outer membrane efflux protein. (691 aa)    
Predicted Functional Partners:
KLU07917.1
Membrane spanning export protein.
  
   0.794
KLU03860.1
Heat shock protein 60 family chaperone GroEL.
  
    0.767
KLU02445.1
Putative protein-transmembrane region and signal peptide prediction.
  
     0.760
KLU02577.1
Hypothetical protein.
  
     0.751
KLU07926.1
Hypothetical protein.
  
     0.748
KLU06138.1
Hypothetical protein.
  
     0.747
KLU02850.1
Protein secretion system.
  
   0.743
KLU06136.1
Multidrug efflux pump.
  
   0.739
KLU05522.1
Putative Co/Zn/Cd efflux system membrane fusion protein.
  
   0.739
KLU03753.1
Putative protein-transmembrane prediction.
  
  
 0.738
Your Current Organism:
Rhodopirellula islandica
NCBI taxonomy Id: 595434
Other names: DSM 24040, JCM 17612, R. islandica, Rhodopirellula sp. K833, strain K833
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