STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU03359.1Putative protein-putative transmembrane protein. (609 aa)    
Predicted Functional Partners:
KLU03360.1
ABC transporter ATP binding protein.
       0.782
KLU03361.1
Putative biotin regulatory protein BioR (GntR family).
       0.782
KLU03362.1
Transcriptional control; Belongs to the sigma-70 factor family. ECF subfamily.
       0.529
KLU03363.1
Putative protein-transmembrane prediction.
       0.529
KLU03364.1
Putative protein-putative transmembrane protein.
       0.529
KLU03365.1
Type IV fimbrial assembly protein PilC; Overlaps another CDS with the same product name.
       0.529
KLU03366.1
Type IV fimbrial assembly protein PilC; Overlaps another CDS with the same product name.
       0.529
KLU03367.1
Putative transmembrane protein; Overlaps another CDS with the same product name; putative protein-transmembrane prediction.
       0.430
KLU03368.1
Putative transmembrane protein; Overlaps another CDS with the same product name; putative protein-transmembrane prediction.
       0.430
Your Current Organism:
Rhodopirellula islandica
NCBI taxonomy Id: 595434
Other names: DSM 24040, JCM 17612, R. islandica, Rhodopirellula sp. K833, strain K833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.