STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU02022.1Choline-sulfatase. (740 aa)    
Predicted Functional Partners:
KLU07811.1
Choline-sulfatase.
  
     0.683
KLU02023.1
Sulfatase.
 
    
0.657
KLU07184.1
Sulfatase.
  
     0.605
KLU03797.1
Hypothetical protein.
  
     0.525
KLU02306.1
SIR2-like domain protein.
  
     0.518
KLU07486.1
Bll2701 protein.
  
     0.490
KLU02026.1
Choline-sulfatase.
 
    
0.465
KLU07170.1
N-acetylgalactosamine 6-sulfatase (GALNS).
  
     0.453
KLU04778.1
Cell surface protein.
  
     0.441
KLU02024.1
Hypothetical protein.
       0.426
Your Current Organism:
Rhodopirellula islandica
NCBI taxonomy Id: 595434
Other names: DSM 24040, JCM 17612, R. islandica, Rhodopirellula sp. K833, strain K833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.