STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU01684.1Amino-acid transporters. (729 aa)    
Predicted Functional Partners:
nadE
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.771
KLU06726.1
Maltodextrin glucosidase.
   
 0.720
KLU06539.1
Sucrose phosphorylase.
   
 0.720
KLU06109.1
Sucrose phosphorylase.
   
 0.720
aroE
3-dehydroquinate dehydratase I; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA); Belongs to the type-I 3-dehydroquinase family.
 
 
 0.595
KLU01683.1
Hypothetical protein.
       0.571
KLU03842.1
Malonyl CoA-acyl carrier protein transacylase.
  
 0.543
KLU01685.1
Hypothetical protein.
       0.456
KLU05222.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
 
 0.418
KLU07030.1
Glutamate synthase [NADPH] large chain.
  
  
 0.415
Your Current Organism:
Rhodopirellula islandica
NCBI taxonomy Id: 595434
Other names: DSM 24040, JCM 17612, R. islandica, Rhodopirellula sp. K833, strain K833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.