Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KLU01726.1 | KLU01729.1 | RISK_006225 | RISK_006228 | Hypothetical protein. | Hypothetical protein. | 0.487 |
KLU01726.1 | gatC | RISK_006225 | RISK_006227 | Hypothetical protein. | Aspartyl-tRNA(Asn) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.487 |
KLU01726.1 | rpmB | RISK_006225 | RISK_006226 | Hypothetical protein. | LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family. | 0.487 |
KLU01729.1 | KLU01726.1 | RISK_006228 | RISK_006225 | Hypothetical protein. | Hypothetical protein. | 0.487 |
KLU01729.1 | gatC | RISK_006228 | RISK_006227 | Hypothetical protein. | Aspartyl-tRNA(Asn) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.773 |
KLU01729.1 | rpmB | RISK_006228 | RISK_006226 | Hypothetical protein. | LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family. | 0.773 |
gatC | KLU01726.1 | RISK_006227 | RISK_006225 | Aspartyl-tRNA(Asn) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | Hypothetical protein. | 0.487 |
gatC | KLU01729.1 | RISK_006227 | RISK_006228 | Aspartyl-tRNA(Asn) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | Hypothetical protein. | 0.773 |
gatC | rpmB | RISK_006227 | RISK_006226 | Aspartyl-tRNA(Asn) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family. | 0.812 |
rpmB | KLU01726.1 | RISK_006226 | RISK_006225 | LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family. | Hypothetical protein. | 0.487 |
rpmB | KLU01729.1 | RISK_006226 | RISK_006228 | LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family. | Hypothetical protein. | 0.773 |
rpmB | gatC | RISK_006226 | RISK_006227 | LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family. | Aspartyl-tRNA(Asn) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.812 |