STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI46455.1Transcriptional regulator, AraC family. (354 aa)    
Predicted Functional Partners:
EMI46456.1
Xylose isomerase domain protein TIM barrel.
 
     0.820
EMI43732.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
     
 0.684
EMI45278.1
Glutamate synthase (NADH) large subunit.
    
  0.602
EMI43224.1
Transcriptional regulator, AraC family.
  
   0.597
EMI43514.1
Hypothetical protein.
  
    0.592
EMI46222.1
Hypothetical protein.
  
     0.554
EMI46868.1
Xylose operon regulatory protein.
  
 
 0.549
EMI42622.1
Putative secreted protein.
  
     0.546
EMI47472.1
Hypothetical protein.
  
     0.538
EMI43508.1
Xylose operon regulatory protein.
  
     0.537
Your Current Organism:
Rhodopirellula sp. SWK7
NCBI taxonomy Id: 595460
Other names: R. sp. SWK7
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.