STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI46104.1Steroid delta5-4-isomerase. (295 aa)    
Predicted Functional Partners:
EMI41843.1
Hypothetical protein.
  
     0.706
EMI46113.1
Carbohydrate-selective porin OprB; Belongs to the OprB family.
  
     0.691
EMI40963.1
Putative secreted protein.
  
     0.678
EMI44856.1
RNA polymerase sigma-E factor-like protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.655
EMI41409.1
Stress responsive alpha-beta barrel domain protein.
  
     0.648
EMI44357.1
Hypothetical protein.
  
     0.642
EMI44829.1
Hypothetical protein.
  
     0.637
EMI41508.1
Protein containing DUF1549.
  
     0.590
EMI41151.1
Protein containing DUF1559.
  
     0.587
EMI43174.1
Protein containing DUF1559.
  
     0.585
Your Current Organism:
Rhodopirellula sp. SWK7
NCBI taxonomy Id: 595460
Other names: R. sp. SWK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.