STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI45445.1Phosphodiesterase/alkaline phosphatase D. (486 aa)    
Predicted Functional Partners:
EMI41255.1
Alkaline phosphatase.
  
 
 0.726
EMI43164.1
Phosphodiesterase/alkaline phosphatase D-like protein.
  
  
 
0.667
EMI44396.1
Secreted alkaline phosphatase.
  
  
 
0.609
EMI43767.1
Alkaline phosphatase D.
  
  
  0.596
EMI42622.1
Putative secreted protein.
  
     0.590
EMI45446.1
Hypothetical protein.
       0.584
EMI47076.1
Beta-agarase.
  
     0.580
folE
GTP cyclohydrolase I.
    
 0.579
EMI42621.1
FG-GAP repeat protein.
  
     0.547
EMI43514.1
Hypothetical protein.
  
     0.529
Your Current Organism:
Rhodopirellula sp. SWK7
NCBI taxonomy Id: 595460
Other names: R. sp. SWK7
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.