Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EMI40413.1 | EMI41588.1 | RRSWK_07125 | RRSWK_05878 | Type II and III secretion system domain protein; Belongs to the bacterial secretin family. | Hypothetical protein. | 0.759 |
EMI40413.1 | EMI41909.1 | RRSWK_07125 | RRSWK_05724 | Type II and III secretion system domain protein; Belongs to the bacterial secretin family. | Hypothetical protein. | 0.770 |
EMI40413.1 | EMI44102.1 | RRSWK_07125 | RRSWK_03427 | Type II and III secretion system domain protein; Belongs to the bacterial secretin family. | Type IV pilus assembly protein PilM. | 0.698 |
EMI40413.1 | EMI44145.1 | RRSWK_07125 | RRSWK_03340 | Type II and III secretion system domain protein; Belongs to the bacterial secretin family. | Hypothetical protein. | 0.722 |
EMI40413.1 | EMI44492.1 | RRSWK_07125 | RRSWK_02996 | Type II and III secretion system domain protein; Belongs to the bacterial secretin family. | Lipoprotein. | 0.676 |
EMI40413.1 | EMI44661.1 | RRSWK_07125 | RRSWK_02727 | Type II and III secretion system domain protein; Belongs to the bacterial secretin family. | Sigma-70 factor. | 0.539 |
EMI40413.1 | EMI45611.1 | RRSWK_07125 | RRSWK_02015 | Type II and III secretion system domain protein; Belongs to the bacterial secretin family. | Protein containing DUF1559. | 0.546 |
EMI40413.1 | EMI47296.1 | RRSWK_07125 | RRSWK_00302 | Type II and III secretion system domain protein; Belongs to the bacterial secretin family. | Flagellar P-ring protein. | 0.761 |
EMI40413.1 | rpoZ | RRSWK_07125 | RRSWK_04866 | Type II and III secretion system domain protein; Belongs to the bacterial secretin family. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.689 |
EMI40993.1 | EMI44102.1 | RRSWK_06525 | RRSWK_03427 | Glycosyl transferase group 1. | Type IV pilus assembly protein PilM. | 0.477 |
EMI40993.1 | EMI45611.1 | RRSWK_06525 | RRSWK_02015 | Glycosyl transferase group 1. | Protein containing DUF1559. | 0.612 |
EMI41588.1 | EMI40413.1 | RRSWK_05878 | RRSWK_07125 | Hypothetical protein. | Type II and III secretion system domain protein; Belongs to the bacterial secretin family. | 0.759 |
EMI41588.1 | EMI41909.1 | RRSWK_05878 | RRSWK_05724 | Hypothetical protein. | Hypothetical protein. | 0.976 |
EMI41588.1 | EMI44102.1 | RRSWK_05878 | RRSWK_03427 | Hypothetical protein. | Type IV pilus assembly protein PilM. | 0.696 |
EMI41588.1 | EMI44145.1 | RRSWK_05878 | RRSWK_03340 | Hypothetical protein. | Hypothetical protein. | 0.769 |
EMI41588.1 | EMI44492.1 | RRSWK_05878 | RRSWK_02996 | Hypothetical protein. | Lipoprotein. | 0.767 |
EMI41588.1 | EMI44661.1 | RRSWK_05878 | RRSWK_02727 | Hypothetical protein. | Sigma-70 factor. | 0.724 |
EMI41588.1 | EMI45611.1 | RRSWK_05878 | RRSWK_02015 | Hypothetical protein. | Protein containing DUF1559. | 0.613 |
EMI41588.1 | EMI47296.1 | RRSWK_05878 | RRSWK_00302 | Hypothetical protein. | Flagellar P-ring protein. | 0.774 |
EMI41588.1 | rpoZ | RRSWK_05878 | RRSWK_04866 | Hypothetical protein. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.772 |
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