STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI45664.1ABC transporter permease/ATP-binding protein. (900 aa)    
Predicted Functional Partners:
EMI45663.1
Secretion protein HlyD family protein.
 
  
 0.951
EMI45963.1
Sodium extrusion ABC transporter,permease protein.
  
 
 0.946
EMI45665.1
ABC transporter (permease protein).
 
 
 
0.869
EMI46982.1
ABC-2 type transporter.
 
 
0.833
cysN
Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
    
 0.617
EMI47066.1
Polyketide synthase type I.
  
 
 0.599
EMI42293.1
Membrane protein containing ABC transporter-like protein.
    
0.587
EMI40456.1
Non-ribosomal peptide synthetase.
  
  
 0.568
EMI46010.1
Putative membrane protein.
  
 
 0.553
EMI41817.1
SecC motif-containing protein.
  
 
 0.553
Your Current Organism:
Rhodopirellula sp. SWK7
NCBI taxonomy Id: 595460
Other names: R. sp. SWK7
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