STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI45073.1Secreted protein containing DUF1501. (466 aa)    
Predicted Functional Partners:
EMI45074.1
Planctomycete cytochrome C domain protein.
 
     0.884
EMI46878.1
Planctomycete cytochrome C domain protein.
  
     0.774
EMI46901.1
Planctomycete cytochrome C domain protein.
  
     0.774
EMI46905.1
Planctomycete cytochrome C domain protein.
  
     0.774
EMI47110.1
Planctomycete cytochrome C domain protein.
  
     0.774
EMI46680.1
Planctomycete cytochrome C domain protein.
  
     0.774
EMI45165.1
Planctomycete cytochrome C domain protein.
  
     0.774
EMI45169.1
Planctomycete cytochrome C domain protein.
  
     0.774
EMI45018.1
Planctomycete cytochrome C domain protein.
  
     0.774
EMI45024.1
Planctomycete cytochrome C domain protein.
  
     0.774
Your Current Organism:
Rhodopirellula sp. SWK7
NCBI taxonomy Id: 595460
Other names: R. sp. SWK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.