Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EMI40779.1 | EMI44859.1 | RRSWK_06698 | RRSWK_02925 | Cytochrome c-type biogenesis protein CcsB. | Uncharacterized conserved protein UCP033563. | 0.484 |
EMI43732.1 | EMI44859.1 | RRSWK_03757 | RRSWK_02925 | Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. | Uncharacterized conserved protein UCP033563. | 0.876 |
EMI43732.1 | EMI44860.1 | RRSWK_03757 | RRSWK_02926 | Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.923 |
EMI44858.1 | EMI44859.1 | RRSWK_02924 | RRSWK_02925 | Delta 9 acyl-lipid fatty acid desaturase. | Uncharacterized conserved protein UCP033563. | 0.541 |
EMI44858.1 | EMI44860.1 | RRSWK_02924 | RRSWK_02926 | Delta 9 acyl-lipid fatty acid desaturase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.411 |
EMI44859.1 | EMI40779.1 | RRSWK_02925 | RRSWK_06698 | Uncharacterized conserved protein UCP033563. | Cytochrome c-type biogenesis protein CcsB. | 0.484 |
EMI44859.1 | EMI43732.1 | RRSWK_02925 | RRSWK_03757 | Uncharacterized conserved protein UCP033563. | Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. | 0.876 |
EMI44859.1 | EMI44858.1 | RRSWK_02925 | RRSWK_02924 | Uncharacterized conserved protein UCP033563. | Delta 9 acyl-lipid fatty acid desaturase. | 0.541 |
EMI44859.1 | EMI44860.1 | RRSWK_02925 | RRSWK_02926 | Uncharacterized conserved protein UCP033563. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.602 |
EMI44859.1 | serC | RRSWK_02925 | RRSWK_02927 | Uncharacterized conserved protein UCP033563. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.452 |
EMI44860.1 | EMI43732.1 | RRSWK_02926 | RRSWK_03757 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. | 0.923 |
EMI44860.1 | EMI44858.1 | RRSWK_02926 | RRSWK_02924 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Delta 9 acyl-lipid fatty acid desaturase. | 0.411 |
EMI44860.1 | EMI44859.1 | RRSWK_02926 | RRSWK_02925 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Uncharacterized conserved protein UCP033563. | 0.602 |
EMI44860.1 | serC | RRSWK_02926 | RRSWK_02927 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.992 |
serC | EMI44859.1 | RRSWK_02927 | RRSWK_02925 | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | Uncharacterized conserved protein UCP033563. | 0.452 |
serC | EMI44860.1 | RRSWK_02927 | RRSWK_02926 | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.992 |