STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI44439.1Transposase IS4 family protein. (209 aa)    
Predicted Functional Partners:
EMI46634.1
Transposase IS4 family protein.
 
     0.909
EMI45187.1
Transposase IS4 family protein.
 
     0.885
EMI46451.1
Transposase.
 
     0.827
EMI46452.1
Transposase.
  
     0.774
EMI45172.1
Transposase.
  
     0.774
EMI41303.1
Transposase.
  
     0.614
EMI41304.1
Transposase.
  
     0.504
EMI45117.1
Transposase.
  
     0.487
EMI46090.1
Transposase IS116/IS110/IS902 family protein.
  
     0.482
EMI42198.1
Transposase IS66.
  
     0.441
Your Current Organism:
Rhodopirellula sp. SWK7
NCBI taxonomy Id: 595460
Other names: R. sp. SWK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.