STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI44217.1Secreted protein-putative xanthan lyase. (678 aa)    
Predicted Functional Partners:
EMI40456.1
Non-ribosomal peptide synthetase.
  
 
 0.861
EMI46671.1
Pyridine nucleotide-disulfide oxidoreductase.
  
     0.746
EMI46572.1
Acetyl xylan esterase.
  
     0.717
EMI43513.1
Fumarate reductase/succinate dehydrogenase flavoprotein.
 
 
 0.695
EMI41564.1
Protein containing DUF1080.
  
     0.666
EMI43752.1
Secreted protein.
  
     0.607
EMI43397.1
Arylsulfatase.
  
     0.600
EMI45617.1
Putative secreted protein.
  
     0.585
EMI45838.1
Xylose isomerase domain protein TIM barrel.
  
     0.578
EMI46734.1
Planctomycete cytochrome C domain protein.
  
     0.572
Your Current Organism:
Rhodopirellula sp. SWK7
NCBI taxonomy Id: 595460
Other names: R. sp. SWK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.