STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI43433.1Glycosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (366 aa)    
Predicted Functional Partners:
EMI46595.1
Signal peptide protein.
  
     0.709
EMI43723.1
ABC transporter integral membrane protein.
  
     0.694
EMI47018.1
Signal peptide protein.
  
     0.689
EMI44268.1
Cell surface protein.
  
     0.656
EMI40381.1
Lipolytic protein G-D-S-L family.
    
 0.637
EMI41125.1
Protein containing DUF1559.
  
     0.613
EMI42085.1
Protein containing DUF1559.
  
     0.605
EMI47465.1
Hypothetical protein.
 
    0.595
EMI45329.1
RNA polymerase sigma-70 ECF-like protein.
  
     0.588
EMI43077.1
Protein containing DUF1559.
  
     0.577
Your Current Organism:
Rhodopirellula sp. SWK7
NCBI taxonomy Id: 595460
Other names: R. sp. SWK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.