STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI43472.1Putative membrane protein. (528 aa)    
Predicted Functional Partners:
EMI46463.1
Fibrinogen-binding protein.
  
     0.699
EMI45195.1
Hypothetical protein.
  
     0.699
EMI44374.1
IgA-specific metalloendopeptidase.
  
     0.679
EMI46618.1
Signal peptide protein.
  
     0.675
EMI45486.1
Serine/threonine-protein kinase.
  
     0.674
EMI46269.1
Repeat domain protein.
  
     0.673
EMI43354.1
Putative membrane protein.
  
     0.649
EMI44698.1
Hypothetical protein.
  
     0.641
EMI42424.1
Hypothetical protein.
  
     0.639
EMI46017.1
Hypothetical protein.
  
     0.638
Your Current Organism:
Rhodopirellula sp. SWK7
NCBI taxonomy Id: 595460
Other names: R. sp. SWK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.