STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI42867.1Glycosyl transferase family 2. (254 aa)    
Predicted Functional Partners:
EMI42866.1
Hypothetical protein.
       0.773
EMI46571.1
Glycosyl transferase family 2.
  
     0.751
EMI42865.1
Hypothetical protein.
       0.618
EMI42429.1
Glycosyl transferase, group 2 family protein.
  
  
 
0.618
EMI42868.1
formamidopyrimidine-DNA glycosylase.
       0.586
EMI42548.1
Glycosyl transferase group 1.
  
    0.505
EMI44115.1
Glycosyl transferase, group 2 family protein.
  
  
 
0.483
rplA
50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
       0.463
EMI41817.1
SecC motif-containing protein.
  
 0.404
Your Current Organism:
Rhodopirellula sp. SWK7
NCBI taxonomy Id: 595460
Other names: R. sp. SWK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.