STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI42369.1ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family. (149 aa)    
Predicted Functional Partners:
clpB
Protein disaggregation chaperone; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.912
EMI43103.1
Negative regulator of genetic competence ClpC/mecB; Belongs to the ClpA/ClpB family.
  
 
 0.912
EMI45218.1
DNA-binding protein Dps; Belongs to the Dps family.
   
 
 0.882
EMI42370.1
Hypothetical protein.
       0.762
EMI42371.1
Hydrolase, TatD family.
       0.762
EMI41437.1
Oxidoreductase domain protein.
  
     0.691
EMI43913.1
Hypothetical protein.
  
     0.658
EMI43136.1
Xylose isomerase domain protein TIM barrel.
  
     0.654
EMI41576.1
Putative membrane protein.
  
     0.653
EMI41053.1
Hypothetical protein.
 
   
 0.653
Your Current Organism:
Rhodopirellula sp. SWK7
NCBI taxonomy Id: 595460
Other names: R. sp. SWK7
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