Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EMI40357.1 | EMI41526.1 | RRSWK_07150 | RRSWK_05942 | AraC family transcriptional regulator. | Multi-sensor signal transduction histidine kinase. | 0.468 |
EMI40357.1 | EMI42202.1 | RRSWK_07150 | RRSWK_05202 | AraC family transcriptional regulator. | Xylose operon regulatory protein. | 0.632 |
EMI40357.1 | EMI43732.1 | RRSWK_07150 | RRSWK_03757 | AraC family transcriptional regulator. | Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. | 0.684 |
EMI40357.1 | EMI45278.1 | RRSWK_07150 | RRSWK_02267 | AraC family transcriptional regulator. | Glutamate synthase (NADH) large subunit. | 0.602 |
EMI40357.1 | EMI46791.1 | RRSWK_07150 | RRSWK_00447 | AraC family transcriptional regulator. | Transcriptional regulator, AraC family protein. | 0.710 |
EMI40456.1 | EMI41526.1 | RRSWK_06865 | RRSWK_05942 | Non-ribosomal peptide synthetase. | Multi-sensor signal transduction histidine kinase. | 0.970 |
EMI40456.1 | EMI42202.1 | RRSWK_06865 | RRSWK_05202 | Non-ribosomal peptide synthetase. | Xylose operon regulatory protein. | 0.917 |
EMI40456.1 | EMI43224.1 | RRSWK_06865 | RRSWK_04189 | Non-ribosomal peptide synthetase. | Transcriptional regulator, AraC family. | 0.611 |
EMI40456.1 | EMI43732.1 | RRSWK_06865 | RRSWK_03757 | Non-ribosomal peptide synthetase. | Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. | 0.992 |
EMI40456.1 | EMI45278.1 | RRSWK_06865 | RRSWK_02267 | Non-ribosomal peptide synthetase. | Glutamate synthase (NADH) large subunit. | 0.905 |
EMI41526.1 | EMI40357.1 | RRSWK_05942 | RRSWK_07150 | Multi-sensor signal transduction histidine kinase. | AraC family transcriptional regulator. | 0.468 |
EMI41526.1 | EMI40456.1 | RRSWK_05942 | RRSWK_06865 | Multi-sensor signal transduction histidine kinase. | Non-ribosomal peptide synthetase. | 0.970 |
EMI41526.1 | EMI41889.1 | RRSWK_05942 | RRSWK_05704 | Multi-sensor signal transduction histidine kinase. | Transcriptional regulator, AraC family. | 0.468 |
EMI41526.1 | EMI42202.1 | RRSWK_05942 | RRSWK_05202 | Multi-sensor signal transduction histidine kinase. | Xylose operon regulatory protein. | 0.607 |
EMI41526.1 | EMI43224.1 | RRSWK_05942 | RRSWK_04189 | Multi-sensor signal transduction histidine kinase. | Transcriptional regulator, AraC family. | 0.609 |
EMI41526.1 | EMI43732.1 | RRSWK_05942 | RRSWK_03757 | Multi-sensor signal transduction histidine kinase. | Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. | 0.759 |
EMI41526.1 | EMI45278.1 | RRSWK_05942 | RRSWK_02267 | Multi-sensor signal transduction histidine kinase. | Glutamate synthase (NADH) large subunit. | 0.647 |
EMI41526.1 | EMI46791.1 | RRSWK_05942 | RRSWK_00447 | Multi-sensor signal transduction histidine kinase. | Transcriptional regulator, AraC family protein. | 0.468 |
EMI41526.1 | ribA | RRSWK_05942 | RRSWK_05328 | Multi-sensor signal transduction histidine kinase. | Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family. | 0.936 |
EMI41889.1 | EMI41526.1 | RRSWK_05704 | RRSWK_05942 | Transcriptional regulator, AraC family. | Multi-sensor signal transduction histidine kinase. | 0.468 |
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