STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI41974.1Hypothetical protein. (496 aa)    
Predicted Functional Partners:
EMI41975.1
Membrane protein containing Exosortase, EpsH, 8 transmembrane domain protein.
 
     0.944
EMI42141.1
Peptidase.
  
 
 
 0.805
EMI46059.1
Pentaxin.
  
 
   0.787
EMI40555.1
Peptidase domain protein.
  
 
   0.786
EMI43598.1
G-cadherin.
  
 
   0.783
EMI46463.1
Fibrinogen-binding protein.
  
 
   0.781
EMI44698.1
Hypothetical protein.
  
 
   0.777
EMI44722.1
Hypothetical protein.
 
     0.776
EMI40968.1
Putative secreted protein.
 
     0.775
EMI45206.1
Protein containing DUF11.
  
 
   0.774
Your Current Organism:
Rhodopirellula sp. SWK7
NCBI taxonomy Id: 595460
Other names: R. sp. SWK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.