STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI41606.12,3-bisphosphoglycerate-independent phosphoglycerate mutase. (312 aa)    
Predicted Functional Partners:
EMI46527.1
Protein containing ATP-binding region, ATPase-like protein.
  
 
 0.896
EMI46825.1
Sensory transduction histidine kinase.
   
 
 0.891
EMI41527.1
Multi-sensor hybrid histidine kinase.
  
 
 0.848
EMI41526.1
Multi-sensor signal transduction histidine kinase.
 
 
 0.843
EMI46666.1
Alkaline phosphatase.
  
 
 0.806
EMI43453.1
Diguanylate cyclase with PAS/PAC sensor.
   
 
 0.778
EMI44618.1
Sensory box sensor histidine kinase/response regulator.
     
 0.761
EMI42948.1
Two-component hybrid sensor and regulator.
     
 0.761
EMI42809.1
Two-component hybrid sensor and regulator.
     
 0.761
EMI43632.1
Adenylyl cyclase CyaB.
     
 0.751
Your Current Organism:
Rhodopirellula sp. SWK7
NCBI taxonomy Id: 595460
Other names: R. sp. SWK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.