STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI41469.1Planctomycete cytochrome C domain protein. (1019 aa)    
Predicted Functional Partners:
EMI46922.1
Cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
  
 0.981
EMI41538.1
Cytochrome c oxidase, subunit II.
  
 0.961
EMI41468.1
Protein containing DUF1501.
 
     0.953
EMI44124.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit.
  
 0.912
EMI41470.1
FecR protein domain protein.
 
     0.904
EMI41471.1
RNA polymerase sigma-70 ECF-like, Rhodopirellula baltica; Belongs to the sigma-70 factor family. ECF subfamily.
       0.785
EMI46900.1
Protein containing DUF1501.
  
     0.771
EMI45073.1
Secreted protein containing DUF1501.
  
     0.767
EMI42444.1
Secreted protein containing DUF1501.
  
     0.767
EMI46733.1
Secreted protein containing DUF1501.
  
     0.765
Your Current Organism:
Rhodopirellula sp. SWK7
NCBI taxonomy Id: 595460
Other names: R. sp. SWK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.