STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI41485.1Transcriptional regulator, AraC family protein. (303 aa)    
Predicted Functional Partners:
EMI43224.1
Transcriptional regulator, AraC family.
  
   0.746
EMI43732.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
     
 0.684
EMI46762.1
Transcriptional regulator, AraC family.
  
     0.644
EMI45278.1
Glutamate synthase (NADH) large subunit.
    
  0.602
EMI45780.1
Transcriptional regulator, AraC family.
  
     0.580
EMI45769.1
Xylose operon regulatory protein.
  
 
 0.551
EMI42965.1
Xylose operon regulatory protein.
  
     0.537
EMI44305.1
Xylose operon regulatory protein.
  
 
 0.478
EMI41526.1
Multi-sensor signal transduction histidine kinase.
   
 
 0.468
EMI46868.1
Xylose operon regulatory protein.
  
 
 0.440
Your Current Organism:
Rhodopirellula sp. SWK7
NCBI taxonomy Id: 595460
Other names: R. sp. SWK7
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.