STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI41034.1Cytochrome c oxidase, subunit III. (207 aa)    
Predicted Functional Partners:
EMI41538.1
Cytochrome c oxidase, subunit II.
 
 0.999
EMI44130.1
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.998
EMI44131.1
Cytochrome c oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 0.996
EMI41537.1
Cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 0.991
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 
 0.986
EMI41389.1
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit.
   
 
 0.959
EMI44132.1
Cytochrome C oxidase subunit III.
 
  
  0.951
EMI40392.1
Proton-translocating NADH-quinone oxidoreductase, chain M.
   
 
 0.949
atpB
F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
   
 
 0.946
atpB-2
ATPase, F0 complex, subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
   
 
 0.946
Your Current Organism:
Rhodopirellula sp. SWK7
NCBI taxonomy Id: 595460
Other names: R. sp. SWK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.