STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI40414.1Signal peptide protein. (597 aa)    
Predicted Functional Partners:
EMI42652.1
Hypothetical protein.
  
    0.765
EMI44722.1
Hypothetical protein.
  
     0.764
EMI44870.1
Mammalian cell entry related domain protein.
  
     0.764
EMI44113.1
Hypothetical protein.
  
     0.764
EMI42411.1
Hypothetical protein.
  
     0.759
EMI42141.1
Peptidase.
  
     0.758
EMI44021.1
Glycoside hydrolase family 10.
  
     0.757
EMI40556.1
Peptidase domain protein.
  
     0.756
EMI40968.1
Putative secreted protein.
  
     0.755
EMI45195.1
Hypothetical protein.
  
     0.753
Your Current Organism:
Rhodopirellula sp. SWK7
NCBI taxonomy Id: 595460
Other names: R. sp. SWK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.