Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EMI42541.1 | EMI45220.1 | RRSWK_04730 | RRSWK_02209 | RNP-1 like RNA-binding protein. | Metallo-beta-lactamase family protein. | 0.914 |
EMI42541.1 | EMI45437.1 | RRSWK_04730 | RRSWK_01841 | RNP-1 like RNA-binding protein. | mRNA processing exonuclease. | 0.914 |
EMI42541.1 | gpmI | RRSWK_04730 | RRSWK_06914 | RNP-1 like RNA-binding protein. | Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.974 |
EMI42565.1 | eno | RRSWK_04754 | RRSWK_00442 | Glycerate kinase. | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.716 |
EMI42565.1 | eno-2 | RRSWK_04754 | RRSWK_02830 | Glycerate kinase. | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.716 |
EMI42565.1 | gpmI | RRSWK_04754 | RRSWK_06914 | Glycerate kinase. | Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.850 |
EMI42565.1 | pgk | RRSWK_04754 | RRSWK_02440 | Glycerate kinase. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.508 |
EMI42565.1 | tpiA | RRSWK_04754 | RRSWK_04870 | Glycerate kinase. | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.860 |
EMI44852.1 | EMI44860.1 | RRSWK_02918 | RRSWK_02926 | Putative homoserine kinase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.858 |
EMI44852.1 | eno | RRSWK_02918 | RRSWK_00442 | Putative homoserine kinase. | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.840 |
EMI44852.1 | eno-2 | RRSWK_02918 | RRSWK_02830 | Putative homoserine kinase. | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.840 |
EMI44852.1 | gpmI | RRSWK_02918 | RRSWK_06914 | Putative homoserine kinase. | Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.879 |
EMI44852.1 | pgk | RRSWK_02918 | RRSWK_02440 | Putative homoserine kinase. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.943 |
EMI44852.1 | tpiA | RRSWK_02918 | RRSWK_04870 | Putative homoserine kinase. | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.576 |
EMI44860.1 | EMI44852.1 | RRSWK_02926 | RRSWK_02918 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Putative homoserine kinase. | 0.858 |
EMI44860.1 | gpmI | RRSWK_02926 | RRSWK_06914 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.850 |
EMI45220.1 | EMI42541.1 | RRSWK_02209 | RRSWK_04730 | Metallo-beta-lactamase family protein. | RNP-1 like RNA-binding protein. | 0.914 |
EMI45220.1 | gpmI | RRSWK_02209 | RRSWK_06914 | Metallo-beta-lactamase family protein. | Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.855 |
EMI45437.1 | EMI42541.1 | RRSWK_01841 | RRSWK_04730 | mRNA processing exonuclease. | RNP-1 like RNA-binding protein. | 0.914 |
EMI45437.1 | gpmI | RRSWK_01841 | RRSWK_06914 | mRNA processing exonuclease. | Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.855 |
page 1 of 3