STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI40557.1Von Willebrand factor, type A domain protein. (404 aa)    
Predicted Functional Partners:
EMI42130.1
Protein containing Alpha-2-macroglobulin.
  
     0.635
EMI40558.1
Preprotein translocase subunit SecA.
       0.506
EMI40456.1
Non-ribosomal peptide synthetase.
 
 
  0.484
EMI45898.1
Ribonuclease H-related protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
  
     0.480
EMI46006.1
Magnesium protoporphyrin chelatase.
  
 0.471
EMI46929.1
Cytochrome oxidase maturation protein cbb3-type.
  
     0.446
EMI44360.1
Von Willebrand factor, type A domain protein.
  
     0.402
Your Current Organism:
Rhodopirellula sp. SWK7
NCBI taxonomy Id: 595460
Other names: R. sp. SWK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.