STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMI40605.1Protein containing DUF58. (319 aa)    
Predicted Functional Partners:
EMI40607.1
Membrane protein containing DUF1355.
 
     0.879
EMI40606.1
Membrane protein containing DUF1550.
 
    0.863
EMI40608.1
Myosin heavy chain.
 
     0.807
EMI40604.1
Methanol dehydrogenase regulator (moxR)-like protein.
 
    0.766
EMI41957.1
BatA protein.
  
    0.739
EMI41958.1
BatB.
 
    0.713
EMI44566.1
Von Willebrand factor type A.
  
    0.706
EMI44565.1
BatA protein.
  
    0.702
EMI45519.1
Von Willebrand factor type A (vWA) domain-containing protein.
  
    0.612
EMI40603.1
Calmodulin.
       0.609
Your Current Organism:
Rhodopirellula sp. SWK7
NCBI taxonomy Id: 595460
Other names: R. sp. SWK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.